8.6.13

An induction to my research conduction (and other reflections)

I can’t say I have used the word induction much in my life thus far.  I am much more accustomed to saying ‘introduction’ or ‘orientation’, but regardless of how you say it, for me this week has seen a lot of inductions – a departmental induction, a laboratory induction, an induction for each lab protocol and instrumentation inductions – the word has been muttered more times than I can count.  I thought I’d carry along the “theme” of the week to my blog and give my readers an induction to what I will actually be doing here at Oxford.  J 

I’m going to assume if you’re reading this that you are both familiar with the alphabet and are, at minimum, through kindergarten.  In that case, everyone knows that the alphabet provides building blocks for words which, in turn, allow us to assemble sentences and ultimately communicate with each other.  One can think of DNA like the alphabet – it provides us with building blocks in which to assemble something – namely proteins.  Proteins, in my analogy, are like words.  Several proteins act together to perform certain cellular functions, much like several words come together to form sentences. 

Take for example the sentence “I look to you for love and guidance.”  Each word in the sentence is needed to relay this loving message.  Now let’s say we slightly modify the sentence as such: “I looked to you for love and guidance.”  These words, uttered by a loved one who has lost trust in us would certainly cause pain.  All it took was one slight word modification and the entire meaning of the sentence changed.  This is also the case with proteins.  While in their most basic form proteins are capable of performing their given function, they also can be modified to alter their function and allow for fine tuning of cellular processes.  One example of this is through oxidative modification of proteins.  In small amounts, oxidative modifications of proteins are essential for healthy cellular function.  However, in large quantities they can be detrimental – “I’ed looked to youed for loved and guidanced.” – rubbish!

For many of the proteins in the cell, we have a pretty good idea of what they do in their unmodified state.  However, what happens to the protein’s function when it is modified (if it even can be modified in that particular way) and how that alters the overall cellular state is not fully understood.  Even more so, we are interested in protein modifications in the context of a given disease (in our case, oxidation of proteins during atrial fibrillation).  Why do they occur?  When do they occur?  The ultimate goal is to identify which modifications are bad for the cell and what causes them so that we can find ways to prevent the modifications from occurring and hopefully prevent the disease (or possibly reverse it if a patient arrives at the hospital with the disease already).  So there you go – my best attempt to breakdown what I do.

So why did I need to go to Oxford to do this?  That’s certainly a question I’ve gotten a lot from people.  The reality is, I didn’t.  There are plenty of people in the US that are studying this question (and thank goodness there are because I’m quickly finding there is loads to study) and in all honesty I’m sure I would have found a postdoc with one of them just fine.  But the truth is, this is what God has always had planned for me - a truth that hasn’t taken me long to see since arriving. 

Just before leaving I did a bit of reading on culture shock, mostly so I’d know what to expect in the first few weeks here and also to learn ways to help deal with it.  Particularly since I knew I would be dealing with the changes on top of missing James, Grace and Patrick I wanted to be prepared.  The funny thing is, all that reading was for nothing.  I haven’t felt the slightest bit of culture shock.  Living in Oxford isn’t much different than living in Chicago so making the transition was easy.  When I realized this, that’s when I saw it!  The tapestry God has woven for me.  I could go on and on about all the things I saw from my past that made this move possible, or easier, or even serendipitous (when I was in elementary school my Aunt and Uncle gave me a University of Oxford long sleeve t-shirt – I can’t remember why - and I remember looking at it and saying to myself “one day I’m going to go there!”), but I won’t.  All I will say is realizing this has made the last few weeks a joy and not a challenge.  I certainly miss my family, but I have no regrets.  I don’t question if this was ever the right decision because I know in my heart it was.  I only hope that everyone reading this tries to see their own tapestry, and when you do, stand back and revel in all its beauty instead of trying to pick at the threads.   

27.5.13

A beautiful beginning

Sorry it has taken me awhile to get up and blogging, but here we go...

It's been less than a week since I've arrived in Oxford and already I'm in love.  The first day was a bit bumpy - I left my US cell phone on the bus from London, but thanks to the kind British folks I was able to get it back the next day.  They even provided me a ride to and from the bus company offices.  Since then I have been out every day exploring Oxford.  So much to see!
Oxford City Centre

I've headed to the city centre (downtown) pretty much every day since I've arrived.  It's so lovely and the buildings are magnificent.  Nothing like downtown Chicago.  The city centre is speckled with colleges associated with the University of Oxford and each one is intertwined with shops, cafes and houses.  They're all quite majestic in their own right, with some of the most well-known Scholars, such as Albert Einstein, studying among their walls.  In fact, although I have yet to venture inside the building and see it for myself, I overheard a tour guide mention that the chalkboard scribbled on by Albert Einstein remains inside the college and the writings are still there. 

Tarreced houses within the city centre

 The terraced houses in the city centre are an array of lovely colours (and yes, I'm trying to get accustomed to spelling things the British way since my job involves a bit of writing).  Also, if you noticed from the picture, it was raining at the time I took this.  One thing I have learned - the hard way on the first day - there is always a chance of rain!  I've begun keeping an umbrella in my purse at all times. 

Since coffee isn't a household norm here (and for those of you who don't know, I enjoy my morning cup of coffee) my first stop each day is for a latte...and occasionally again in the afternoon.  I still haven't quite figured out the lingo for afternoon tea (there are various terms for a variety of teas and scones).
 
Over the weekend I ventured out and found some of the most breathtaking views of Oxford, which include Magdalen College (if you don't pronounce it 'Maudlin', you're sure to be a foreigner), Christ
Church meadows and Old Headington. The most interesting thing about all of them is that they are smack-dab in the middle of the city. One minute you are weaving in and out of all the foot traffic, dodging buses and the next, you pop down a small lane or through a gate and *poof* you're in the middle of a wide open field that's as quiet and calm as can be. It's no wonder writers such as C.S. Lewis (the Chronicles of Narnia) and Lewis Carroll (Alice's Adventures in Wonderland) were able to dream up such masterpieces in Oxford. In fact, I picnicked today next to the Isis River - an extension of the River Thames that runs through Oxford - the location in which Alice's Adventures were first told. Ironically, we are also planning to move in to a house just around the corner from where C.S. Lewis lived!  That particular house, and the one I'm staying in now, is in Headington - which is like a suburb or neighborhood of Oxford.  It has its own little main street with grocery stores, cafes and small shops.  The John Radcliffe Hospital, where I will be working, is there as well.  Headington itself is not quite as "Cotswold-y" as Old Headington, but it is a nice area, with a large library and park for James and the kids.
 
I've posted below some of my favourite pictures from my walks  - but the truth is, none of them quite capture the beauty of the living scenes.  I guess you'll just have to come to Oxford and see for yourselves!
Old Headington

The streets of Old Headington
Cuckoo's Lane in Old Headington

Christ Church Meadow


Magdalen College Botanical Gardens
Isis River




Christ Church

Magdalen College - Gate toward the grounds